>Npas2-201-1 (aa120-183 of ENSMUST00000056815, pfscan)  Mus_musculus 
NEEFTQLMLEALDGFVIVVTTDGSIIYVSDSITPLLGHLPADVMDQNLLNFLPEQEHSEVYKI
>Arnt2-201-2 (aa368-419 of ENSMUST00000085077, pfscan)  Mus_musculus 
NSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKL
>Arntl-202-1 (aa150-215 of ENSMUST00000084703, pfscan)  Mus_musculus Arntl-201-1 (aa143-208 of ENSMUST00000047321, pfscan)  Mus_musculus Arntl-203-1 (aa130-195 of ENSMUST00000106637, pfscan)  Mus_musculus 
SDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQ
>Npas3-201-2 (aa339-394 of ENSMUST00000021396, pfscan)  Mus_musculus 
VTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNK
>Sim1-201-1 (aa77-140 of ENSMUST00000020071, pfscan)  Mus_musculus 
GRELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIYEYIHPADHDEMTAV
>Arntl2-001-2 (aa317-366 of ENSMUST00000111639, pfscan)  Mus_musculus Arntl2-003-2 (aa317-366 of ENSMUST00000111636, pfscan)  Mus_musculus Arntl2-201-2 (aa317-366 of ENSMUST00000080530, pfscan)  Mus_musculus 
NGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSLTDKHKAVLQS
>Ncoa2-201-1 (aa119-183 of ENSMUST00000081713, pfscan)  Mus_musculus Ncoa2-002-1 (aa119-183 of ENSMUST00000006037, pfscan)  Mus_musculus Ncoa2-001-1 (aa119-183 of ENSMUST00000068304, pfscan)  Mus_musculus 
MLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSMVN
>Arntl2-001-1 (aa119-184 of ENSMUST00000111639, pfscan)  Mus_musculus Arntl2-003-1 (aa119-184 of ENSMUST00000111636, pfscan)  Mus_musculus Arntl2-004-1 (aa119-184 of ENSMUST00000129788, pfscan)  Mus_musculus Arntl2-005-1 (aa119-184 of ENSMUST00000111638, pfscan)  Mus_musculus Arntl2-201-1 (aa119-184 of ENSMUST00000080530, pfscan)  Mus_musculus 
QDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLIGQNLFDFLHPKDVAKVKEQ
>Hif1a-003-1 (aa68-136 of ENSMUST00000110461, pfscan)  Mus_musculus Hif1a-001-1 (aa80-148 of ENSMUST00000021530, pfscan)  Mus_musculus Hif1a-002-1 (aa80-148 of ENSMUST00000110464, pfscan)  Mus_musculus 
SEDEMKAQMDCFYLKALDGFVMVLTDDGDMVYISDNVNKYMGLTQFELTGHSVFDFTHPCDHEEMREM
>Arntl2-005-2 (aa317-371 of ENSMUST00000111638, pfscan)  Mus_musculus 
NGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHSSLTDKHKADSYKFRVKD
>Pask-001-1 (aa132-188 of ENSMUST00000027493, pfscan)  Mus_musculus 
VFTVDAKTTEILVANDKACSLLGYSSHDLIGQKLAQFFLKSDSEVVEALSEEHVEA
>Pde8b-001-1 (aa169-233 of ENSMUST00000162412, pfscan)  Mus_musculus Pde8b-004-1 (aa169-233 of ENSMUST00000162153, pfscan)  Mus_musculus Pde8b-202-1 (aa170-234 of ENSMUST00000067082, pfscan)  Mus_musculus 
ALDHCHEAIEITSDDHVIQYVNPAFERMMGYHKGELLGKELADLPKSDKNRADLLDTINTCIKK
>Per3-001-1 (aa280-326 of ENSMUST00000103204, pfscan)  Mus_musculus Per3-004-1 (aa280-326 of ENSMUST00000136398, pfscan)  Mus_musculus 
FLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKY
>Npas2-201-2 (aa298-345 of ENSMUST00000056815, pfscan)  Mus_musculus 
KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQF
>Ncoa1-201-1 (aa109-180 of ENSMUST00000072464, pfscan)  Mus_musculus Ncoa1-202-1 (aa109-180 of ENSMUST00000085814, pfscan)  Mus_musculus 
KESLGPLLLEALDGFFFVVNCEGRIVFVSENVTSYLGYNQEELMNTSVYSILHVGDHAEFVKNLLPKSLVN
>Per2-201-1 (aa344-387 of ENSMUST00000069620, pfscan)  Mus_musculus 
VDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQA
>Sim2-201-2 (aa233-288 of ENSMUST00000072182, pfscan)  Mus_musculus 
MFRASLDLKLIFLDSRVTELTGYEPQDLIEKTLYHHVHGCDTFHLRYAHHLLLVK
>Arntl-202-2 (aa354-403 of ENSMUST00000084703, pfscan)  Mus_musculus Arntl-201-2 (aa347-396 of ENSMUST00000047321, pfscan)  Mus_musculus Arntl-203-2 (aa334-383 of ENSMUST00000106637, pfscan)  Mus_musculus 
DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQT
>Epas1-201-2 (aa249-300 of ENSMUST00000024954, pfscan)  Mus_musculus Epas1-202-2 (aa249-300 of ENSMUST00000112273, pfscan)  Mus_musculus 
SMDMKFTYCDDRILELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTK
>Arnt-009-1 (aa105-126 of ENSMUST00000136413, pfscan)  Mus_musculus 
QELLGKNIVEFCHPEDQQLLR
>Npas1-201-1 (aa141-198 of ENSMUST00000002053, pfscan)  Mus_musculus 
HILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHSEVLEQ
>Kcnh1-001-1 (aa14-94 of ENSMUST00000078470, pfscan)  Mus_musculus Kcnh1-002-1 (aa14-94 of ENSMUST00000110844, pfscan)  Mus_musculus 
QNTFLENIVRRSNDTNFVLGNAQIVDWPIVYSNDGFCKLSGYHRAEVMQKSSACSFMYGELTDKDTVEKVRQTFENYEMN
>Npas4-201-1 (aa70-144 of ENSMUST00000056129, pfscan)  Mus_musculus Npas4-202-1 (aa70-144 of ENSMUST00000113754, pfscan)  Mus_musculus 
SAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTMPSALDA
>Hif1a-003-2 (aa235-286 of ENSMUST00000110461, pfscan)  Mus_musculus Hif1a-001-2 (aa247-298 of ENSMUST00000021530, pfscan)  Mus_musculus 
SLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTK
>Kcnh3-202-1 (aa42-90 of ENSMUST00000088254, pfscan)  Mus_musculus Kcnh3-201-1 (aa42-90 of ENSMUST00000041415, pfscan)  Mus_musculus 
VVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKALDE
>Arnt-202-1 (aa146-220 of ENSMUST00000090804, pfscan)  Mus_musculus Arnt-201-1 (aa141-215 of ENSMUST00000015666, pfscan)  Mus_musculus Arnt-003-1 (aa146-220 of ENSMUST00000107161, pfscan)  Mus_musculus Arnt-001-1 (aa161-235 of ENSMUST00000102749, pfscan)  Mus_musculus 
DQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTG
>Npas3-201-1 (aa158-222 of ENSMUST00000021396, pfscan)  Mus_musculus 
HILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPP
>Per1-003-1 (aa373-416 of ENSMUST00000101004, pfscan)  Mus_musculus Per1-001-1 (aa373-416 of ENSMUST00000021271, pfscan)  Mus_musculus Per1-004-1 (aa373-416 of ENSMUST00000142392, pfscan)  Mus_musculus Per1-002-1 (aa353-396 of ENSMUST00000102605, pfscan)  Mus_musculus 
VDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQL
>Ncoa3-001-1 (aa118-181 of ENSMUST00000109252, pfscan)  Mus_musculus Ncoa3-201-1 (aa118-181 of ENSMUST00000088095, pfscan)  Mus_musculus 
LLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEQDRKDFLKHLPKSTVN
>Kcnh2-001-1 (aa41-70 of ENSMUST00000036092, pfscan)  Mus_musculus 
VIYCNDGFCELCGYSRAEVMQRPCTCDFL
>Sim1-201-2 (aa233-270 of ENSMUST00000020071, pfscan)  Mus_musculus 
MFRASLDMKLIFLDSRVAELTGYEPQDLIEKTLYHHV
>Arnt2-201-1 (aa160-235 of ENSMUST00000085077, pfscan)  Mus_musculus 
TEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTG
>Ncoa3-202-1 (aa118-167 of ENSMUST00000099082, pfscan)  Mus_musculus 
LLQALDGFLFVVNRDGNIVFVSENVTQYLQYKQEDLVNTSVYSILHEQD
>Hif3a-002-1 (aa90-145 of ENSMUST00000108492, pfscan)  Mus_musculus Hif3a-001-1 (aa88-143 of ENSMUST00000037762, pfscan)  Mus_musculus 
LKALEGFVMVLTAEGDMAYLSENVSKHLGLSQLELIGHSIFDFIHPCDQEELQDA
>Ahr-201-1 (aa116-179 of ENSMUST00000019400, pfscan)  Mus_musculus Ahr-203-1 (aa185-248 of ENSMUST00000116436, pfscan)  Mus_musculus Ahr-202-1 (aa116-179 of ENSMUST00000110811, pfscan)  Mus_musculus 
LLQALNGFVLVVTADALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNP
>Kcnh4-001-1 (aa14-90 of ENSMUST00000107363, pfscan)  Mus_musculus Kcnh4-002-1 (aa14-90 of ENSMUST00000107361, pfscan)  Mus_musculus Kcnh4-201-1 (aa14-90 of ENSMUST00000092679, pfscan)  Mus_musculus 
FLDTIATRFDGTHSNFLLANAQGPRGFPIVYCSDGFCELTGYGRTEVMQKTCSCRFLYGPETSEPALQRLQKALEG
>Hif3a-002-2 (aa246-297 of ENSMUST00000108492, pfscan)  Mus_musculus Hif3a-001-2 (aa244-295 of ENSMUST00000037762, pfscan)  Mus_musculus 
SLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVSRSIHTLLSK
>Ahrr-002-1 (aa1-48 of ENSMUST00000109640, pfscan)  Mus_musculus 
MIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDP
>Npas4-201-2 (aa229-275 of ENSMUST00000056129, pfscan)  Mus_musculus Npas4-202-2 (aa229-275 of ENSMUST00000113754, pfscan)  Mus_musculus 
LLDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQHYRLLAE
>Sim2-201-1 (aa77-140 of ENSMUST00000072182, pfscan)  Mus_musculus 
AKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELTGNSIYEYIHPSDHDEMTAV
>Arnt-202-2 (aa353-404 of ENSMUST00000090804, pfscan)  Mus_musculus Arnt-201-2 (aa348-399 of ENSMUST00000015666, pfscan)  Mus_musculus Arnt-003-2 (aa353-404 of ENSMUST00000107161, pfscan)  Mus_musculus Arnt-001-2 (aa368-419 of ENSMUST00000102749, pfscan)  Mus_musculus 
NIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKL
>Clock-201-2 (aa287-334 of ENSMUST00000031148, pfscan)  Mus_musculus Clock-203-2 (aa285-332 of ENSMUST00000113497, pfscan)  Mus_musculus Clock-204-2 (aa285-332 of ENSMUST00000113499, pfscan)  Mus_musculus Clock-202-2 (aa285-332 of ENSMUST00000075159, pfscan)  Mus_musculus 
KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY
>Pde8a-001-1 (aa216-256 of ENSMUST00000026672, pfscan)  Mus_musculus 
ALEKSQEAIEITSEDHIIQYANPAFESTMGYQSGELIGKE
>Ahrr-001-1 (aa111-176 of ENSMUST00000022059, pfscan)  Mus_musculus 
RLLLESLNGFALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDP
>Epas1-201-1 (aa92-147 of ENSMUST00000024954, pfscan)  Mus_musculus Epas1-202-1 (aa92-147 of ENSMUST00000112273, pfscan)  Mus_musculus 
LKALEGFIAVVTQDGDMIFLSENISKFMGLTQVELTGHSIFDFTHPCDHEEIREN
>Clock-201-1 (aa109-179 of ENSMUST00000031148, pfscan)  Mus_musculus Clock-203-1 (aa107-177 of ENSMUST00000113497, pfscan)  Mus_musculus Clock-204-1 (aa107-177 of ENSMUST00000113499, pfscan)  Mus_musculus Clock-202-1 (aa107-177 of ENSMUST00000075159, pfscan)  Mus_musculus 
NEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLE